Publications

Highlights

For a full list see below or go to Google Scholar or PubMed. Code is available on our GitHub repo.

Linking structure and function in macroscale brain networks

We explore structure-function relationships in brain networks from the perspective of microscale annotations, hierarchies and neuromodulation.

Suarez LE, Markello RD, Betzel RF, Misic B

Trends Cogn Sci (2020)

Spatial patterning of tissue volume loss in schizophrenia reflects brain network architecture

Schizophrenia is marked by distributed patterns of tissue volume loss, but what is their origin? We show that tissue volume loss closely follows connectome architecture.

Shafiei G, Markello RD, Makowski C, Talpalaru A, Kirschner M, Devenyi GA, Guma E, Hagmann P, Cashman N, Lepage M, Chakravarty MM, Dagher A, Misic B

Biol Psychiat (2020)

Connectome architecture, gene expression and functional co-activation shape the spread of neurodegenerative disease

We use agent-based models to simulate the propagation of misfolded proteins in Parkinson’s disease. Our model highlights the joint contribution of local vulnerability and global network architecture in shaping disease course.

Zheng YQ, Zhang Y, Yau Y, Zeighami Y, Larcher K, Misic B†, Dagher A†

PLoS Biol (2019)

Gradients of structure-function tethering across neocortex

Structure-function coupling is not uniform across cortex. We show gradual divergence through the unimodal-transmodal hierarchy.

Vazquez-Rodriguez B, Suarez LE, Markello RD, Shafiei G, Paquola C, van den Heuvel MP, Hagmann P, Hagmann P, Bernhardt BC, Spreng RN, Misic B

Proc Natl Acad Sci USA (2019)

Distance-dependent consistency thresholds for generating group-representative structural networks

Consistency thresholding of connectomes is improved when taking into account the spatial embedding of the brain.

Betzel RF, Griffa A, Hagmann P, Misic B

Net Neurosci (2019)

Dopamine signaling modulates the stability and integration of intrinsic brain networks

Dopamine depletion can be used to selectively destabilize and disconnect intrinsic brain networks.

Shafiei G, Zeighami Y, Clark CA, Coull JT, Nagano-Saito A, Leyton M, Dagher A, Misic B

Cereb Cortex (2019)

Communication dynamics in complex brain networks

Our review article about principles of neural signaling in large-scale brain networks.

Avena-Koenigsberger A, Misic B, Sporns O

Nat Rev Neurosci (2018)

 

Full List

Mapping electromagnetic networks to haemodynamic networks in the human brain
Shafiei G, Baillet S, Misic B
bioRxiv (2021)

Distinct and dissociable EEG networks are associated with recovery of cognitive function following anesthesia-induced unconsciousness
Rokos A, Misic B, Berkun K, Duclos C, Tarnal V, Janke E, Picton P, Golmirzaie G, Basner M, Avidan MS, Kelz MB, Mashour GA, Blain-Moraes S
Front Hum Neurosci (2021)

Metabolic and functional connectvity provide unique and complementary insights into cognition-connectome relationships
Voigt K, Liang EX, Misic B, Ward PGD, Egan GF, Jamadar SD
bioRxiv (2021)

Multiscale communication in cortico-cortical networks
Bazinet V, Vos de Wael R, Hagmann P, Bernhardt BC, Misic B
NeuroImage (2021)

Global network structure and local transcriptomic vulnerability shape atrophy in sporadic and genetic behavioral variant frontotemporal dementia
Shafiei G, Bazinet V, Dadar M, Manera AL, Collins DL, Dagher A, FTLDNI, GENFI, Misic B, Ducharme S
bioRxiv (2021)

Learning function from structure in neuromorphic networks
Suarez LE, Richards BA, Lajoie G, Misic B
Nat Mach Intell (2021)

Standardizing workflows in imaging transcriptomics with the abagen toolbox
Markello RD, Arnatkeviciute A, Poline JB, Fulcher BD, Fornito A, Misic B
bioRxiv (2021)

Time-resolved structure-function coupling in human brain networks
Liu ZQ, Vazquez-Rodriguez B, Spreng RN, Bernhardt BC, Betzel RF, Misic B
bioRxiv (2021)

Structural connectivity gradients of the temporal lobe serve as multiscale axes of brain organization and cortical evolution
Vos de Wael R, Royer J, Tavakol S, Wang Y, Paquola C, Benkarim O, Eichert N, Lariviere S, Misic B, Smallwood J, Valk S, Bernhardt BC
Cereb Cortex (2021)

Sex differences in age- and episodic memory-related effects on task-based functional connectivity
Subramaniapillai S, Rajagopal S, Ankudowich E, Pasvanis S, Misic B, Rajah MN
bioRxiv (2021)

Local structure-function relationships in brain networks across the human lifespan
Esfahlani FZ, Faskowitz J, Slack J, Misic B, Betzel RF
bioRxiv (2021)

Brain charts for the human lifespan
Bethlehem RAI, Seidlitz J, White SR, et al.
bioRxiv (2021)

Schizophrenia polygenic risk links to multiscale cortical organization
Kirschner M, Paquola C, Khundrakpam BS, Vainik U, Bhutani N, Hodzic-Santor B, Al-Sharif N, Misic B, Bernhardt BC, Evans AC, Dagher A
bioRxiv (2021)

Progression of brain atrophy in Parkinson’s disease is shaped by connectome and local vulnerability
Tremblay C, Rahayel S, Vo A, Morys F, Shafiei G, Markello RD, Gan-Or Z, Misic B, Dagher A
medRxiv (2021)

An algorithm-based multiple detection influence measure for high dimensional regression using expectile
Barry A, Bhagwat N, Misic B, Poline JB, Greenwood CMT
arXiv (2021)

Early or late exposure to maternal immune activation alters neurodevelopmental trajectories in mice: an integrated neuroimaging, behavioural, and transcriptional study
Guma E, Bordignon P, Devenyi GA, Gallino D, Anastassiadis C, Cvetkovska V, Barry A, Snook E, Germann J, Greenwood CT, Misic B, Bagot RC, Chakravarty MM
Biol Psychiat (2021)

Comparing spatial null models for brain maps
Markello RD, Misic B
NeuroImage (2021)

Mapping gene transcription and neurocognition across human neocortex
Hansen JY, Markello RD, Vogel JW, Seidlitz J, Bzdok D, Misic B
Nat Hum Behav (2021)

An edge-centric model for harmonizing multi-relational network datasets
Faskowitz J, Tanner JC, Misic B, Betzel RF
bioRxiv (2021)

Multimodal phenotypic axes of Parkinson’s disease
Markello RD, Shafiei G, Tremblay C, Postuma RB, Dagher A, Misic B
npj Parkinsons Dis (2021)

Topological impact of negative links on the stability of resting-state brain network
Saberi M, Khosrowabadi R, Khatibi A, Misic B, Khosrowabadi R
Sci Rep (2021)

Understanding the impact of preprocessing pipelines on neuroimaging cortical surface analysis
Bhagwat N, Barry A, Dickie EW, Brown ST, Devenyi GA, Hatano K, DuPre E, Dagher A, Chakravarty MM, Greenwood CT, Misic B, Kennedy DN, Poline JB
GigaScience (2021)

Topographic gradients of intrinsic dynamics across neocortex
Shafiei G, Markello RD, Vos de Wael R, Bernhardt BC, Fulcher BD, Misic B
eLife (2020)

Evaluating analytical and biological impliations of observed instabilities in diffusion MRI pipelines
Kiar G, de Oliveira Castro P, Petit E, Rokem A, Varoquaux G, Misic B, Glatard T, Evans AC
bioRxiv (2020)

Asymmetric influence measure for high dimensional regression
Barry A, Bhagwat N, Misic B, Poline JB, Greenwood CT
Commun Stat (2020)

A prodromal brain‐clinical pattern of cognition in synucleinopathies
Rahayel S, Postuma RB, Montplaisir J, Misic B, Tremblay C, Yao C, Gaubert M, Carrier J, Monchi O, Blanc F, Chouinard F, Panisset M, Dagher A, Gagnon JF
Ann Neurol (2020)

The R1-weighted connectome: complementing brain networks with a myelin-sensitive measure
Boshkovski T, Kocarev L, Cohen-Adad J, Misic B, Lehericy S, Stikov N, Mancini M
Net Neurosci (2021)

Propofol-induced alterations in brain connectivity reflect parvalbumin interneuron distribution in the human cortex
Craig MM, Misic B, Pappas I, Adapa R, Menon VK, Stamatakis EA
Br J Anaesth (2020)

Network communication in the brain
Graham D, Avena-Koenigsberger A, Misic B
Net Neurosci (2020)

Signal diffusion along connectome gradients and inter-hub routing differentially contribute to dynamic human brain function
Park BY, vos de Wael R, Paquola C, Lariviere S, Benkarim O, Royer J, Tavakol S, Cruces RR, Li Q, Valk SL, Margulies DS, Misic B, Bzdok D, Smallwood J, Bernhardt BC
NeuroImage (2020)

Network topology of the marmoset connectome
Liu ZQ, Zheng YQ, Misic B
Net Neurosci (2020)

Latent clinical-anatomical dimensions of schizophrenia
Kirschner M, Shafiei G, Markello RD, Talpalaru A, Makowski C, Devenyi GA, Paquola C, Bernhardt BC, Chakravarty MM, Dagher A, Misic B
Schiz Bull (2020)

Single-cell RNA-seq reveals that glioblastoma recapitulates a normal neurodevelopmental hierarchy
Couturier CP, Ayyadhury S, Le PU, Monglong J, Allache R, Amin S, Riva G, Bourgey M, Lee C, Yan X, Wang D, Yong W, Guiot MC, Misic B, Antel J, Bourque G, Ragoussis J, Petrecca K
Nat Commun (2020)

Linking structure and function in macroscale brain networks
Suarez LE, Markello RD, Betzel RF, Misic B
Trends Cogn Sci (2020)

Signal propagation via cortical hierarchies
Vazquez-Rodriguez B, Liu ZQ, Hagmann P, Misic B
Net Neurosci (2020)

Spatial patterning of tissue volume loss in schizophrenia reflects brain network architecture
Shafiei G, Markello RD, Makowski C, Talpalaru A, Kirschner M, Devenyi GA, Guma E, Hagmann P, Cashman N, Lepage M, Chakravarty MM, Dagher A, Misic B
Biol Psychiat (2020)

BrainSpace: a toolbox for the analysis of macroscale gradients in neuroimaging and connectomics datasets
Vos de Wael R, Benkarim O, Paquola C, Lariviere S, Royer J, Tavakol S, Xu T, Hong SJ, Valk S, Misic B, Milham M, Margulies DS, Smallwood J, Benhardt BC
Commun Biol (2020)

Connectome architecture, gene expression and functional co-activation shape the spread of neurodegenerative disease
Zheng YQ, Zhang Y, Yau Y, Zeighami Y, Larcher K, Misic B†, Dagher A†
PLoS Biol (2019)

Gradients of structure-function tethering across neocortex
Vazquez-Rodriguez B, Suarez LE, Markello RD, Shafiei G, Paquola C, van den Heuvel MP, Hagmann P, Hagmann P, Bernhardt BC, Spreng RN, Misic B
Proc Natl Acad Sci USA (2019)

Microstructural and functional gradients are increasingly dissociated in transmodal cortices
Paquola C, Vos de Wael R, Wagstyl K, Bethlehem RAI, Hong SJ, Seidlitz J, Bullmore ET, Evans AC, Misic B, Margulies DS, Smallwood J, Bernhardt BC
PLoS Biol (2019)

Aβ-induced vulnerability propagates via the brain’s default mode network
Pasocal TA, Mathotaarachchi S, Kang MS, Mohaddes S, Shin M, Park AY, Parent MJ, Benedet AL, Chamoun M, Therriault J, Hwang H, Cuello AC, Misic B, Soucy JP, Aston JAD, Gauthier S, Rosa-Neto P
Nat Commun (2019)

Obesity has limited behavioural overlap with addiction and psychiatric phenotypes
Vainik U, Misic B, Zeighami Y, Michaud A, Mottus R, Dagher A
Nat Hum Behav (2019)

Loneliness and meaning in life is reflected in the intrinsic network architecture of the brain
Mwilambwe-Tshilobo L, Ge T, Chong M, Ferguson MA, Misic B, Burrow AL, Leahy R, Spreng RN
Soc Cogn Affect Neurosci (2019)

Breast cancer treatment and recuperation effects on resting-state functional connectivity
Kardan O, Askren MK, Jung M, Peltier S, Misic B, Churchill NW, Reuter-Lorez PA, Cimprich B, Berman MG
NeuroImage:Clinical (2019)

Tracking mood fluctuations with functional network patterns
Mirchi N, Betzel RF, Bernhardt BC, Dagher A, Misic B
Soc Cogn Affect Neurosci (2019)

Distance-dependent consistency thresholds for generating group-representative structural networks
Betzel RF, Griffa A, Hagmann P, Misic B
Net Neurosci (2019)

Mesolimbic connectivity signatures of impulsivity and BMI in early adolescence
Sharkey RJ, Bourque J, Larcher K, Misic B, Zhang Y, Altinkaya A, Sadikot A, Conrod P, Evans AC, Garavan H, Leyton M, Seguin JR, Pihl R, Dagher A
Appetite (2019)

Dopamine signaling modulates the stability and integration of intrinsic brain networks
Shafiei G, Zeighami Y, Clark CA, Coull JT, Nagano-Saito A, Leyton M, Dagher A, Misic B
Cereb Cortex (2019)

Microstructure-informed connectomics: enriching large-scale network descriptions of the healthy and diseased brain
Larivière S, Vos de Wael R, Paquola C, Hong SJ, Misic B, Bernasconi N, Bernasconi A, Bonilha L, Bernhardt BC
Brain Connectivity (2019)

Neurobehavioural correlates of obesity are largely heritable
Vainik U, Baker T, Dadar M, Zeighami Y, Michaud A, Zhang Y, Alanis JCG, Misic B, Collins DL, Dagher A
Proc Natl Acad Sci USA (2019)

Network-based asymmetry of the human auditory system
Misic B, Betzel RF, Griffa A, de Reus MA, He Y, Zuo XN, van den Heuvel MP, Hagmann P, Sporns O, Zatorre R
Cereb Cortex (2019)

A clinical-anatomical signature of Parkinson’s Disease identified with partial least squares
Zeighami Y, Fereshtehnejad S, Dadar M, Collins DL, Postuma R, Misic B†, Dagher A†
NeuroImage (2019)

Network connectivity predicts cortical thinning and cognitive decline in early Parkinson’s disease
Yau Y, Zeighami Y, Baker T, Larcher K, Vainik U, Dadar M, Fonov V, Misic B, Collins DL, Dagher A
Nat Commun (2018)

Communication dynamics in complex brain networks
Avena-Koenigsberger A, Misic B, Sporns O
Nat Rev Neurosci (2018)

Lesion-symptom mapping including structural and dynamic connectome measures: a modern approach with applications for post-stroke aphasia
Del Gaizo J, Fridriksson J, Yourganov G, Hills AE, Misic B, Hickok G, Rorden C, Bonilha L
eNeuro (2017)

Anatomical and functional organization of the human substantia nigra and its connections
Zhang Y, Larcher K, Misic B, Dagher A
eLife (2017)

Holding onto youth
Dagher A, Misic B
Cell Metab (2017)

Optimized connectome architecture for sensory-motor integration
Worrell JC, Rumschlag J, Betzel RF, Sporns O and Misic B
Net Neurosci (2017)

Small vessel disease is linked to disrupted structural network covariance in Alzheimer’s disease
Nestor SM, Misic B, Ramirez J, Zhao J, Graham SJ, Verhoeff NPLG, Stuss DT, Masellis M and Black SE
Alzheimers Dement (2017)

Integration and segregation of large-scale brain networks during short-term task automatization
Mohr H, Wolfensteller U, Betzel RF, Misic B, Sporns O, Richiardi J and Ruge H
Nat Commun (2016)

Brain network activity during face perception: the impact of familiarity and individual differences in childhood experience
Cloutier J, Li T, Misic B, Correll J and Berman MG
Cereb Cortex (2016)

Dynamic functional connectivity shapes individual differences in learning
Fatima Z, Kovacevic N, Misic B and McIntosh AR
Hum Brain Mapp (2016)

Path ensembles and a tradeoff between communication efficiency and resilience in the human connectome
Avena-Koenigsberger A, Misic B, Hawkins R, Griffa A, Hagmann P, Goñi J and Sporns O
Brain Struct Funct (2016)

Network-level structure-function relationships in human neocortex
Misic B, Betzel RF, de Reus MA, van den Heuvel MP, Berman M, McIntosh AR and Sporns O
Cereb Cortex (2016)

From regions to connections and networks: New bridges between brain and behavior
Misic B and Sporns O
Curr Opin Neurobiol (2016)

Posttraumatic stress constrains the dynamic repertoire of neural activity
Misic B, Dunkley BT, Sedge PA, Da Costa L, Fatima Z, Berman MG, Doesburg SM, McIntosh AR, Grodecki R, Jetly R, Pang EW and Taylor MJ
J Neurosci (2016)

Functional modules reconfigure at multiple scales across the lifespan
Betzel RF, Misic B, He Y, Rumschlag J, Zuo X-N and Sporns O
arXiv (2015)

Generative models of the human connectome
Betzel RF, Avena-Koenigsberger A, Goñi J, He Y, de Reus MA, Griffa A, Vértes PE, Misic B, Thiran JP, Hagmann P, van den Heuvel MP, Zuo XN, Bullmore ET and Sporns O
NeuroImage (2015)

[MEG]PLS: A pipeline for MEG data analysis and PLS statistics
Cheung MJ, Kovacevic N, Fatima Z, Misic B and McIntosh AR
NeuroImage (2015)

A partial least-squares analysis of health related quality of life outcomes after aneurysmal subarachnoid hemorrhage
Young JA, Morgan BR, Misic B, Schweizer TA, Ibrahim GM and Macdonald RL
Neurosurgery (2015)

Quantifying the health benefits of neighborhood greenspace
Kardan O, Gozdyra P, Misic B, Paus T and Berman MG
Sci Reports (2015)

Cooperative and competitive spreading dynamics on the human connectome
Misic B, Betzel RF, Nematzadeh A, Gõni J, Griffa A, Hagmann P, Flammini A, Ahn Y and Sporns O
Neuron (2015)

Stable long-range interhemispheric coordination is supported by direct anatomical projections
Shen K†, Misic B†, Bezgin G, Buschkuehl M, Deldin PJ, Hutchison RM, Jaeggi SM, Kross E, Peltier S, Everling S, Jonides J, McIntosh AR and Berman MG
Proc Natl Acad Sci USA (2015)

Coordinated information generation and mental flexibility: large-scale network disruption in children with autism
Misic B, Doesburg SM, Fatima Z, Vakorin VA, Taylor MJ and McIntosh AR
Cereb Cortex (2015)

A network convergence zone in the hippocampus
Misic B, Goñi J, Betzel RF, Sporns O and McIntosh AR
PLoS Comput Biol (2014)

The functional connectivity landscape of the human brain
Misic, B, Fatima Z, Askren MK, Buschkuehl M, Churchill N, Cimprich B, Deldin PJ, Jaeggi SM, Jung MS, Korostil M, Peltier S, Kross E, Reuter-Lorenz PA, Strother S, Jonides J, McIntosh AR and Berman MG
PLoS ONE (2014)

Does resting-state connectivity reflect depressive rumination? A tale of two analyses
Berman MG, Misic B, Buschkuehl M, Kross E, Deldin PJ, Peltier S, Jaeggi SM, Vakorin V, McIntosh AR and Jonides J
NeuroImage (2014)

Developmental trajectory of face processing revealed by integrative dynamics
Misic B, Mills T, Vakorin VA, Taylor MJ and McIntosh AR
J Cogn Neurosci (2014)

Communication efficiency and congestion of signal traffic in large-scale brain networks
Misic B, Sporns O and McIntosh AR
PLoS Comput Biol (2014)

Using multivariate data reduction to predict post-surgery memory decline in patients with mesial temporal lobe epilepsy
St-Laurent M, McCormick C, Cohn M, Misic B, Giannoylis I and McAndrews MP
Epilepsy Behav (2013)

Effective connectivity
Misic B and McIntosh AR
Brain Mapping:An Encyclopedic Reference, 587-592 (2013)

Exploring changes in dynamical non-stationarity of elecetroencephalographic brain signals in early adolescence
Vakorin VA, McIntosh AR, Misic B, Krakovska, O and Paus T
PLoS ONE (2013)

Confounding effects of phase delay on causality estimation
Vakorin VA, Misic B, Krakovska O, Bezgin G and McIntosh AR
PLoS ONE (2013)

Multivariate statistical analyses for neuroimaging data
McIntosh AR and Misic B
Annu Rev Psychol (2013)

Functional embedding predicts the variability of neural activity
Misic B, Vakorin VA, Paus T and McIntosh AR
Front Syst Neurosci (2011)

Empirical and theoretical aspects of generation and transfer of information in a neuromagnetic source network
Vakorin VA, Misic B, Krakovska O and McIntosh AR
Front Syst Neurosci (2011)

Extracting message inter-departure time distributions from the human electroencephalogram
Misic B, Vakorin VA, Kovacevic N, Paus T and McIntosh AR
PLoS Comput Biol (2011)

Brain noise is task-dependent and region-specific
Misic B, Mills T, Taylor MJ and McIntosh AR
J Neurophysiol (2010)

Knowledge-driven contrast gain control is characterized by two distinct electrocortical markers
Misic B, Schneider BA and McIntosh AR
Front Hum Neurosci (2009)