neuromaps_mouse.regions.visualize_structure_alignment_allenccfv3

neuromaps_mouse.regions.visualize_structure_alignment_allenccfv3(acronyms_fixed, acronyms_moving, save_path=PosixPath('.'), save_name='graphviz')[source]

Visualize the alignment between two sets of brain structures as a graph.

Generates a Graphviz SVG diagram showing the hierarchical relationship between fixed and moving region sets. Requires Graphviz to be installed.

Parameters:

  • acronyms_fixed (array-like of str) – Fixed (reference) region acronyms, marked with a stop symbol in the graph.

  • acronyms_moving (array-like of str) – Moving (source) region acronyms, marked with an arrow in the graph.

  • save_path (str or Path, optional) – Directory to save output files. Default is current directory.

  • save_name (str, optional) – Base filename (without extension) for the output files. Default is ‘graphviz’.